Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MSEINEKVEPQ---PIDLGEYKFGFHDDVKPIYSTGKGLNEAVIRELSAAKGEPEWMLDFRLKSLETFNKMPMQTWGADLSD---------IDFDDIIYYQKASDKPARDWDDVPEKIKETFE--RIGIP-EAERAYLAGASAQYESEVVYHNMKEEYDKLGIVFTDTDSALKEYPELFKKYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDN---VYNLVTKRATAKKDATVEWIDGNLGAKTTMKYPSVYLDGEGACGTMLSIAFANKGQHQDTGAKMIHNAPHTSSSIV-------------------SKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG |
| 3PY7 Chain:A ((3-516)) | IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPD-KLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPAAAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDN--AGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTS--------AVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAMDDLDALLADKPFSGLDCLWCREPLTEVDAFRCMVKDF--HVVIREGCRYGACTICLENCLATERRLWQGVPVT---GEEAELLHGKTLDRLCIRCCY--CGGKLTKNEKHRHVLFN--EPFCK-------TRANIIRGRCYDCCRH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -17556 for 3543 contacts (-5.0/contact) +
2D Compatibility (PS) -46535 + (NN) -804 + (LL) 2060
1D Compatibility (HY) -2400 + (ID) 2950
Total energy: -68185.0 ( -19.24 by residue)
QMean score : 0.170
|
|
|