Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNHDTTEIEIAMKR-PYRYDYGQFTFLKIYQAGFESAAHPFSISGGHD--RVIFLTVKASG--DYTKSIYKQLKVGTKIALDRAYGHMLFDK---DKKEQVWIAGGIGITPFISFIRENSILTKRVDFFYTFSNQDNLIYQDMLESYAKANPNFKLHLNNSS----LQGRLDF-SQSVFEGQPTIFMCGPTSMTSTYAKVFRQKDAKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
| 1EP3 Chain:B ((5-213)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEMMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGA-MLLRRPISISSWDKRAKTCTILYRIGDETTGTYKLS-KLESGAKVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTGCQMTILLGFASENVKILENEFSNLKN----VTLKIATDDGSYGTKGHVGMLMNEIDFEVDALYTCGAPAMLKAVAKKYDQLERLYISMESRMACGIGACYACVEHDKEDESHALKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115135 for 1565 contacts (-73.6/contact) +
2D Compatibility (PS) -20593 + (NN) 542 + (LL) 20028
1D Compatibility (HY) -9600 + (ID) 1550
Total energy: -126308.0 ( -80.71 by residue)
QMean score : 0.399
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