Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKDRQIQKTKVAIYNAFISLLQENDYSKITVQDVIGLANVGRSTFYSHYESKEVLLKELCEDLFHHLFKQGRDVTFEEYLVH----ILKHFEQNQDSIATLLLSD--DPYFLLRFRSELEHDVYPRLREEYITKVDIPEDFLKQFLLSSFIETLKWWLHQRQK-MTVEDLLKYYLTMVER
3BJB Chain:A ((17-197))---SEEQRARHVRMLEAAIELATEKELARVQMHEVAKRAGVAIGTLYRYFPSKTHLFVAVMVDQIDRM-----GESPQDAVYNVLVRATRGLLRRPALSTAMIQSTSTANVASVPDAGKVDRAFRQIMLDAAG-HPTEEDLTALRLLVQLWFGVIQSCLNGRVSIPDAESDIRRACDLLLV


General information:
TITO was launched using:
RESULT:

Template: 3BJB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92882 for 1151 contacts (-80.7/contact) +
2D Compatibility (PS) -17244 + (NN) -9344 + (LL) 760
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -123660.0 ( -107.44 by residue)
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_3BJB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BJB-query.scw
PDB file : Tito_Scwrl_3BJB.pdb: