Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTKKEFILGLTIIITLTLLIMLIFLVMFNKSSNSKLKQTKDRRVLSTSTTRTSSSSHDQKIVEKSLEKKKMVMEQDMELMNAYRLYYDYAHLSLKEVVLAYMSEYGIEKNSVAFSYKNLKTGQRDAMNDTQAMTAGSTYKLPLNMLVVDAVVKGKLSMEERFDITETDY-EYIGEHNNYVAAFSGAMSIDDMQKYSLVYSENTPAYALAERIGGMDSAYSKFGRYGQSKGDIKNI---------QKNGNKVTTDYYIQVLDYLWKHR----KKYDSLITYLEEAF-PTDYYRALIPSDVVVAQKPGYV-REALNVGAIVK-EE-VPYIVAIYTAGLGGSTQEDSEINGVGLYQLEQLCFVINQWHRVNMN |
| 1HZO Chain:A ((4-263)) | ---------------------------------------------------------------------------------------------NTIEEQLNTLEKYS---QGRLGVALINTEDNSQITYRGEERFAMASTSKVMAVAAVLKASEKQAGLLDKNITIKKSDLVAYSPITEKH---LTTGMTLAELSAATLQYSDNTAMNKILDYLGGPAKVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTTSPIAMAKSLQALTLGDALGQSQRQQLVTWLKGNTTGDNSIKAGLPKHWVVGDKTGSGDYGTTNDIAVIWPENHAPLILVVYFTQQEQNAKYRKDI----IAKAAEIVTKEISNS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114213 for 2085 contacts (-54.8/contact) +
2D Compatibility (PS) -25415 + (NN) -1671 + (LL) 9268
1D Compatibility (HY) -2400 + (ID) 1850
Total energy: -136281.0 ( -65.36 by residue)
QMean score : 0.389
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