Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQITFKKVGLDNVNILQNLAIETFRQTFSHDNSEEQLQAFFNESYTLPVLKSEITHA-ESDTYFVYLDTDLVGYLKVNWGSQQTEKDLDKAFEIQRIYLLDAYQGKGIGKATFEFALDLAYKS-GLDWAWLGVWEFNHKAQAFYAKYGFEKFSEHQFSVGDKVDTDWLLRKSLH
3DSB Chain:A ((5-149))
-ELIEIREARMDDLDTIAKFNYNLAKETEGKELDMDVLTKG---------VKALLLDERKGKYHVYTVFDKVVAQIMYTYEWSDWR--NGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESLNMYECDYNMYEYEVIH-----------
General information:
TITO was launched using:
RESULT:
Template:
3DSB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65845 for 941 contacts (-70.0/contact) +
2D Compatibility (PS) -15728 + (NN) -5234 + (LL) 1056
1D Compatibility (HY) -7200 + (ID) 1050
Total energy: -94001.0 ( -99.89 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_3DSB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DSB-query.scw
PDB file :
Tito_Scwrl_3DSB.pdb
: