Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQSYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRNGEAHRV----------PA--GGAMAVDREGYSEAVTEEIHKHPLIEVIRDEI------------------TDIPGDAITVIATGPLTSD---------------------SLAAKIHELNGGDGFYFYDAAAPIVDKNTIDMNKVYLKSRYDKG-EAAYLNCPMT-KEEFMAFHEALTTAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPEDYKGPR---DGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLDQTFATRKNPNLFFAGQMTGVEGYVESAASGLVAGINAARRFNGESEVVF-PQTTAIGALPHYITHT-D----------------------SKHFQPMNVNFGIIKELEGPRIRDKKERYEAIATRALKDLEKFLNY |
| 3CP8 Chain:A ((20-492)) | -HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLS---------AVARMSCNPAIGGV----AKGQITREIDALGGEMGKAIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQ-AKAAILACGTFLNGLIHIGMDHFPGGRSTAEPPVEGLTESLAS-LGFSFGRLKTGTPPRIDSRSVDYTIVTEQPGDVDPVPFSFSSTSVANRNLV-SCYLTKTTEKT---H----DIL--------------RTGFDRSPLFTG-------CPSIEDKISRFPDKSSHHIFLEPEGTDTVEMYVNGFSTSLPEDIQIAGLRSIPGLEEAKMIRPGYAIEYDFFH-PWQIRSTMETRPVENLFFAGQINGTSGYEEAAAQGLMAGINAVRKILGKELIVLGRDQAYIGVLIDDLITKETKEPYRMFTSSAEHRLILRHDNADLRLRKIGYDCNLVSSDDLHRTESIIKRVQHCLEVMKTAKVTPAEI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -114092 for 3342 contacts (-34.1/contact) +
2D Compatibility (PS) -41077 + (NN) -10650 + (LL) 2236
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -183883.0 ( -55.02 by residue)
QMean score : 0.357
|
|
|