Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKFLKRLIALIIIIFIGYRLVIIHENVKKVLQYHDLVQNTLAENGSEANVHLVLSMI-YTETKGDAIDVM-QSSESISGTTNSITDSHTSIKHGVTLLSQNISQAKKAKVDVWTAVQAYNFGSSYIDYVADHGGENSIELAKNYSKNVVAPSLGNYNGDTYFYYHPLALISGGKLYKNGGNIYYSREVQF-----------NLYLIKI-MELF----------------------------------------------------------------------------------------------------------------- |
| 4FDY Chain:A ((46-340)) | -----------------GVTVS------PEVLAHRPLIEKYGKEYGIEDYVSYILA-IMQVESGGTAED-VMQSSESLGLPPNSLS-TEESIKQGVKYFSELLTSAEQQGVDIDSVIQSYNYGGGFLNYVRSHGKKYTYELAEQFSKEKS-------GGQKADYPNPIAIPVNGGWRYNYGNQFYVQLVSQYLTDTSPTEFDDETVQVIMDEALKYEGFPYVFGGASPTTSFDSGLIQWVYDKAGISLPRVAQDQYDATQEISMEEAQAGDLIFFHSTYNAGTYVTHVAIYLEGNRFYHAGDPIGYGDLSSRYWQDHLIGARRVIHN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16220 for 1246 contacts (13.0/contact) +
2D Compatibility (PS) -17137 + (NN) 268 + (LL) 3712
1D Compatibility (HY) -400 + (ID) 950
Total energy: 1713.0 ( 1.37 by residue)
QMean score : 0.090
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