Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNRKDDHIKYALKYQSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYINAMTGG-SEKGKAVNHKLAQVAQATGIVMATGSYSAALKNDEDDSYPTT--DLYPDLKLATNIGLDKPLPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVDNIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDRSYLNTWGQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVDDVIAILNSWKEDLRMIMCALNCKKITDLRQVNYILYGQLKEANAK-----------
1P0K Chain:B ((22-349))------------------ETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMRSFSG----ALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGR--------------QISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGARTIADLQKAPLVIKGETHHWLTERGVNTSSYSVR


General information:
TITO was launched using:
RESULT:

Template: 1P0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -201640 for 2546 contacts (-79.2/contact) +
2D Compatibility (PS) -31743 + (NN) -10694 + (LL) 1936
1D Compatibility (HY) -16000 + (ID) 4550
Total energy: -262691.0 ( -103.18 by residue)
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_1P0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1P0K-query.scw
PDB file : Tito_Scwrl_1P0K.pdb: