Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKELGKTLRRLRKGKKVSISSLADEHLSKSQISRFERGESEITCSRLLNILDKLNITIDEFVSI-HSKAHTHFFILLNRVRKYCAEKNVTKLVALLEDHN--HKDYEKIMIKALIFSIDQSIEPNQEELARLTDYLFTVEQWG------YYEIILLGNCSRLIN-YNTLFLLTKEMVNSFAYSEQNKTNKILVTQLAINCLIISIDHSYFEHSHYLIDKVRSLLQDEVNFYEKTVFLYVTGYYHLKLG-DTSSGKEDMRKALQIFKYLGEDSFYNTYNEHYCQKVLGNNKEC |
| 2QFC Chain:A ((3-286)) | -AEKLGSEIKKIRVLRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKEALVNKISRL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125385 for 1971 contacts (-63.6/contact) +
2D Compatibility (PS) -28755 + (NN) -12772 + (LL) 468
1D Compatibility (HY) -8400 + (ID) 1900
Total energy: -176744.0 ( -89.67 by residue)
QMean score : 0.351
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