Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIYNFSAGPAVLPKPVLVKAQSELLNYQGSSMSVLEVSHRSKEFDDIIKGAERYLRDLMGIPDNYKVIFLQGGASLQFSMIPLNIAR--G-RKAYYHVAGSWGKKAYTEAVKLSK-TIPFEPILLASSEESVYDYIPEFDEKEIDPEAAYVHVTTNNTIEGTSLYDIPKT-NGVPVIADMSSNILAVKYKVEDFAMIYAGAQKNIGPAGVTVVIIREDMINEEP-TLSSMLDYKIQSDASSLYNTPPAYSIYIAKLVFEWVKSLGGVDAMEKANREKSGLLYDYIDSS-EFYSNPVRDKKSRSLCNIPFITINK-DL-D--EKFVKEATERGFKNIKGHRSVGGMRASLYNAFPKQGVIELIDFMKTFEAENA |
| 3E77 Chain:A ((21-376)) | ---------QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH-----PKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFD-FIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCP-VEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMHQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170059 for 2964 contacts (-57.4/contact) +
2D Compatibility (PS) -37387 + (NN) -13830 + (LL) 1396
1D Compatibility (HY) -32400 + (ID) 7850
Total energy: -260130.0 ( -87.76 by residue)
QMean score : 0.558
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