Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------METKINNSQKNRYKFVFGDKPLTLTTDKDNLFMEEIERVATEKYEAIKEKLPNADNETIAILMAINALSVQLSREIDIEKMEDELNKLRSKTISDIKEKVSED----------------------------------------------------------------------------- |
| 1DDT Chain:? ((200-380)) | SCINLDWDVIRDKTKTKIESLKEHGPIKNKMSESPNK-----------TVSEEKAKQYLEEFHQTALEHPELSELKTVTGTNPVFA-GANYAAWAVNVAQVIDSETADN-------------LEKTTAALSILPGIGSVMGIADGAVHHNTEEIVAQSIALSSLMVAQAIPLVGELVDIGFAAYNFVESIINLFQVVHNSYNRPAY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19486 for 423 contacts (46.1/contact) +
2D Compatibility (PS) -8537 + (NN) -5144 + (LL) 1700
1D Compatibility (HY) -800 + (ID) 950
Total energy: 5755.0 ( 13.61 by residue)
QMean score : 0.354
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