Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDD-----LLGIDYVIPDYSYIVENIDRIKALVITHGHEDHIGGIPFLLKQ--ANLPIYAGPLALALIKGKLEEHGL-L----------------RDATLYEIHANTELTFK-NLSVTFFRTTHSIPEPLSIVIHTP--QGKVICTGDFKFDFTPVGEPADLHRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGI---DGRIIFASFASNIFRLQQAAEAAVKTGR------KIAVFGRSMEKAIVNGIEL-GYIKV--------------PKGTFIE---PSELKN-L-HASEVLIMCT-GS--QGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTS-VNKLINTIQEAG----VDVIHGK--INN-IHTSGHGGQQEQKLMLRLIK--PKYFMPVHGEYRMQKVHAG-LAVDTGIPKENIFIMENGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDSKMILAGPDILSRGFIYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRPFLYEKTEREPIIIPMVLTPDK |
| 3AF5 Chain:A ((186-650)) | -------SRWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHF--DAPEFQYV-LREGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGH-ILGSAIVHLHIGNGLHNIAITGDFKFIPTRLLE---PAN-AK--FPRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMA--VGRAQEVMMVLEEYARIGGIEVPIYLDGMIWE-ATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQDIIDSNEPAIIIASSGMLVGGPSVEYFKQLA--------PDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSIHRKFGIS---TRAPNNLDTIRLR------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208435 for 3497 contacts (-59.6/contact) +
2D Compatibility (PS) -43455 + (NN) -21721 + (LL) 9836
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -282375.0 ( -80.75 by residue)
QMean score : 0.433
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