Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIITV------GKLKEKYLKEGVAEYQKRLNRFSKIETIELADEKTP------------DKASISENQRILDIEGERILSKIGERDYVIGLAI-EGKQLPSESFSHLIDQKMISGYSTITFVIGGSLGLSQKVKKRADYLMSFG----------LLTLPHQLMKLVLMEQIYRAFM--IRQGTP-YHK----------------
1TIK Chain:A ((2-204))
SLSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNIS-TQLKNYFDLVARAG-VTFRYTENGPEGLVTG--KKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSAE
General information:
TITO was launched using:
RESULT:
Template:
1TIK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53379 for 1035 contacts (-51.6/contact) +
2D Compatibility (PS) -16754 + (NN) -3937 + (LL) 320
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -78250.0 ( -75.60 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_1TIK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIK-query.scw
PDB file :
Tito_Scwrl_1TIK.pdb
: