Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKADKALLIVDMINNFEFDMGETLAKKTEKIVPHILSLKEHARQN---EWPIIYINDHYGLWQADIKNIQQEC-TNERSKDIITKIAPVDADYFLIKPKHSAFYETALHTLLTELQVRHIIITGIAGNICVLFTANDAYMREYSITIPKDCIASNSDEDNEFALTMMENVLFAEITTEEQIIEK
3HB7 Chain:A ((3-184))
QGMAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLS-IF-TKVMTVDQYIQ-
General information:
TITO was launched using:
RESULT:
Template:
3HB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104975 for 1439 contacts (-72.9/contact) +
2D Compatibility (PS) -18722 + (NN) -4896 + (LL) 116
1D Compatibility (HY) -9200 + (ID) 2300
Total energy: -139977.0 ( -97.27 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_3HB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HB7-query.scw
PDB file :
Tito_Scwrl_3HB7.pdb
: