Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILEKAPAKINLS----LDVTRKRPDGYHEVEMIMTTIDLADRIELTELAEDEVRVSSHNRFVPDDQRNLAYQAAKLIKDRYN------VKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTALATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRALKLDGIEH-PDVQGMIEAIEEKSFQKMCSRLGNVLESVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD |
| 2WW4 Chain:A ((1-272)) | MRTQWPSPAKLNLFLYITGQRA----DGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGV-EHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDP-PEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIA-R----------KRFREVDAVLSWLLE-Y-APSRLTGTGACVFAEFDTESEARQVLEQAPEWL-NGFVAKG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132617 for 2175 contacts (-61.0/contact) +
2D Compatibility (PS) -28128 + (NN) -7347 + (LL) 1224
1D Compatibility (HY) -14400 + (ID) 3500
Total energy: -184768.0 ( -84.95 by residue)
QMean score : 0.437
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