Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGSKLQGKITGITNFGAFVELPG-GSTGLVHISEVADNYVKDINDHLKVGDQVEVKVINVEKD-G--KIGLSIKKAKDRPQARPRNDFRPKESFEQKMNKFLKDSEDRLSSLKRNTESKRGGRGARRG
2CQO Chain:A ((13-97))
--PALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKD---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CQO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30673 for 544 contacts (-56.4/contact) +
2D Compatibility (PS) -8438 + (NN) 274 + (LL) 1652
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -44835.0 ( -82.42 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_2CQO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CQO-query.scw
PDB file :
Tito_Scwrl_2CQO.pdb
: