Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVVKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEISVYEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAADVEAAMRMVEGTARSMGIVIED
3CJS Chain:B ((1-72))
-MKKVVAVVKLQLPAGKATPAPPVGPALGQHGANIMEFVKAFNAATANMGDAIVPVEITIYADRSFTFVTKTP--------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CJS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50194 for 499 contacts (-100.6/contact) +
2D Compatibility (PS) -8202 + (NN) -7857 + (LL) 5172
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -71681.0 ( -143.65 by residue)
QMean score : 0.717
(partial model without unconserved sides chains):
PDB file :
Tito_3CJS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CJS-query.scw
PDB file :
Tito_Scwrl_3CJS.pdb
: