Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPEKKSIAIMKELSIGNTKQMLMINGVD-VKNPLLLFLHGGPGTPQIGYVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTINHFIKDTIQVTQWLLAHFSKSKLYLAGHSWGSILALHVLQQRPDLFYTYYGISQVVNPQDEESTAYQHIREISESKKASILSFLTRFIGAPPWKQDIQHLIYRFCVELTRGGFTHRHRQSLAVLFQMLTGNEYGVRNMHSFLNGLRFSKKHLTDELYRFNAFTSVPSIKVPCVFISGKHDLIVPAEISKQYYQELEAPEKRWFQFENSAHTPHIEEPSLFANTLSRHARHHL |
4Q3L Chain:A ((23-291)) | -----------SIFTYQEKDIYYEIDGTLDINSDVIVILNGIMMSTKS-WDA-FVENFSKNHVLLRYDMFDQGQSSKIE---ESYTQTIQVELLKNLLEHL----GIAQANIVGISYGASIALQFAAKYPTMIKRMVVANVVAKTSPWLKDIGDGWNEVAKT--GNGLAYYHIT---IPY----------IYSP-QFYTLHNDWMEKR---KELLVP-LFSTRTFL---DR-MI---RLTKSAETHDVIKDLPNIKTPTLIISSEEDYLTPPFEQKYLQEHL--QNAELVSIPNCGHASMYEVPKTFTALVLGFFGQT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137841 for 2276 contacts (-60.6/contact) +
2D Compatibility (PS) -28037 + (NN) -8110 + (LL) 4764
1D Compatibility (HY) -10800 + (ID) 1950
Total energy: -181974.0 ( -79.95 by residue)
QMean score : 0.407
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