Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKSMIAKQQRTPKFKVQEYTRCERCGRPHSVIRKFKLCRICFRELAYKGQIPGVKKASW
4JI1 Chain:N ((2-61))
-ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW
General information:
TITO was launched using:
RESULT:
Template:
4JI1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25306 for 331 contacts (-76.5/contact) +
2D Compatibility (PS) -6064 + (NN) -1956 + (LL) 208
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -42418.0 ( -128.15 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_4JI1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JI1-query.scw
PDB file :
Tito_Scwrl_4JI1.pdb
: