Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDC-ERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
4NU0 Chain:A ((6-217))
MNLLIMGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETGFLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPP-----VDYKEEDYYQREDDKPETVKRRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLTNLK-
General information:
TITO was launched using:
RESULT:
Template:
4NU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78120 for 1624 contacts (-48.1/contact) +
2D Compatibility (PS) -23508 + (NN) -16555 + (LL) 72
1D Compatibility (HY) -23200 + (ID) 6150
Total energy: -147461.0 ( -90.80 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_4NU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NU0-query.scw
PDB file :
Tito_Scwrl_4NU0.pdb
: