Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIICKTPRELGIMREAGRIVALTHEELKKHIKPGISTKELDQIAERFI-KKQGAIPSFKGYNGFRGSICVSVNEELVHGIPG-SRVLKDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSNISHAIQTYVENEQFSVVREYVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSRYVKTLADNWTVVTVDGKKCAHFEHTIAITETGFDILTRV
4A6V Chain:A ((6-249))
----KTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILT--
General information:
TITO was launched using:
RESULT:
Template:
4A6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83122 for 2119 contacts (-39.2/contact) +
2D Compatibility (PS) -26697 + (NN) -14252 + (LL) 964
1D Compatibility (HY) -22000 + (ID) 5650
Total energy: -150757.0 ( -71.15 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_4A6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A6V-query.scw
PDB file :
Tito_Scwrl_4A6V.pdb
: