Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTY-EVTVPTDKIAITGSV--ESMEDAKLLDVH--PQGAISFSGKFPDMFKDITDKAEPTG-EKMEPNIEKILEMKPDVILASTKF-PEKTLQKISTA-GTTIPVSH-IS-SNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKA--KDSKALVIRIRQ--GNIYIYPEQVYFNSTLYGDLGLKAPNEVKAAKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPL-AQGGTAWSKVRFLKAAAEKLTQN |
5AZ3 Chain:A ((48-332)) | -------------------------------NASPALPVSLTDADGNDVVVE-DVSRI-LPLDLYGTYSKTIAGLGLVDNIVGRTVSST----E--PALADTEVVTTGGHTLNAEAILNLHPTLVIIDHSIGPREVIDQIRAAGVATVIMSPQRSIASIGDDIRDIASVVGLPEEGEKLAERSVAEVEEASTVVDELTPEDPLKMVFLYARGTGGVFFILGDAYGGRD-LIEGLGGVDMAAEKGIMDLAPANAEALAELNPDVFVMMSEGLVS---TGGIDGLMERPGIAQTTAGQNQRVLALPDGQSLAFGAQTG-EL--LLRASRELYV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29844 for 2283 contacts (-13.1/contact) +
2D Compatibility (PS) -29698 + (NN) -15677 + (LL) 3740
1D Compatibility (HY) -6800 + (ID) 2300
Total energy: -80579.0 ( -35.30 by residue)
QMean score : 0.517
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