Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQNAVIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGNGYISIGTNTNPLQKKTLYVCPPNETFGFTPAADGHIDACIIRLLSYIKETGQDIFTPCTESELAKLKLMNVSHIENLAVRLQELAALWNESSQLSQLKCVIEVQSLIYDLFTASLSDQTDTHSAIEKTKHYIETHADTKITLAQLSQMAGISAKHYSESFKKWTGQSVTEFITKTRITKAKRLMAKSNCKLKEIAHQTGYQDEFYFSRIFKKYTGCSPTSYMKKRRKKIAAYGRGTMGHLIPLHHI--PFAAALHPKWTSYYYQHYSTDIPVQLSAYRFNEKWEENLYTLSQAEPDVIVSMDSISPEEQDRLNRIAEVMYLPSE-----ESWRTHFLQTASFLKEE--SEAEKWLADYDQQTTAAKKTLQHVQGLRFLFLRLHKQNFYLAHNRSVREVFFGDLGFSSATTAD--TPSEQAISLENIANYQADCMMLFLFKEP--ETIAYYQQLQQTEAWQNLSAVRDNRVYLLSLDPWNE--YSACGHERIVQQTVSLLSGDCP
4JCC Chain:A ((4-285))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTEVTIKSSL-D-EVKLSK-VPEKIVTFDLGAADTIRALGFAKNIVGMPTKT-VPT-YLKDLVGTVK------NVGSMKEPDLEAIAALEPDLIIASPRT-QKFVDKFKEIAPTVLFQASKDDYWTSTKANIESLASAFGETGTQKAKEELAKLDESIQEVATKNESS-DKKALAILLNEGKMAAFGAKSRFSFLYQTLKFKPTDTKFEDSRHGQEVSFESVKEINPDILFVINRTLAIGGDNSSNDGVLENALIAETPAAKNGKIIQLTPDLWYLSGGGLESTKLMIEDIQKAL-----


General information:
TITO was launched using:
RESULT:

Template: 4JCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155925 for 2206 contacts (-70.7/contact) +
2D Compatibility (PS) -27745 + (NN) -5654 + (LL) 19336
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -177538.0 ( -80.48 by residue)
QMean score : 0.340

(partial model without unconserved sides chains):
PDB file : Tito_4JCC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JCC-query.scw
PDB file : Tito_Scwrl_4JCC.pdb: