Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIA-AGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVIDVLQHQSG-LPSSFYFYTPEKAGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPS--ATDPTFALGWRRNGSKSMEW---------------------MFGPHASENAYGHTGWT---GTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
| 5CGX Chain:A ((7-348)) | ---------------------------------------------APLTATVDGIIQPMLKAYRIPGMAVAVLKDGKAHYF-NYGVANR-------ESGQRVSEQTLFEIGSVSKTLT-ATLGAYAAVKGGFELDDKVSQHAPWLKGS------AFDGVTMAELATYSAGGLPLQFPDE---------VDSNDKMQTYYRSWSPVYPAGTHRQFSNPSIGLFGHLAANSLGQPFEQLMSQTLLPKLGLHHTYIQVPESA--MANYAY----GYSKEDK-------------PI----RATPGVLAAEAYGIKTGSADLLKFVEANMGYQ---GDAALKSA-IALTHTGFHSVGEMTQGLGWESYDYPVTEQVLLAGNSPAVSFQANPVTRFAVPKAMGEQRLYNKTGSTGGFGAYVAFVPARGIAIVMLANRNYPIEA------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110092 for 2680 contacts (-41.1/contact) +
2D Compatibility (PS) -34161 + (NN) -19250 + (LL) 7820
1D Compatibility (HY) -4400 + (ID) 3150
Total energy: -163233.0 ( -60.91 by residue)
QMean score : 0.412
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