Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRVEPPYDVKEALVFTQKMAQLSKALWKSIEKDWQQWLKPYDLNINEHHILWIAYQLNGASISEIAKFGVMHVSTAFNFSKKLEERGYLRFSKRLNDKRNTYVQLTEEGTEVFWSLLEEFDPTRNAVFK--GSQPLYHLFGKFPEVAEMMCMIRHIYGDDFMEIFETSLTNIDNDFESVNGKLKKKAKDSAADEPAEELEPVNS
4EM2 Chain:A ((37-167))------------------EFFNSFITIYRPYLKLTEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEKPTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNISQ--------DQMQETINVMNQI------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4EM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 373 -58847 -157.77 -456.17
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -157.77
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_4EM2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EM2-query.scw
PDB file : Tito_Scwrl_4EM2.pdb: