Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKAKITAIGTYAPSRRLTNADLEKIVDTSDEWIVQRTGMRERRIADEHQFTSDLCIEAVKNLKSRYKGTLDDVDMILVATTTSDYAFPSTACRVQEYFGWESTGALDINATCAGLTYGLHLANGLITSGLHQKILVIAGETLSKVTDYTDRTTCVLFGDAAGALLVERDEETP--GFLASVQGTSGNGGDILYRAGLRNEINGVQLV----GSGKMVQ-NGREVYKWAARTVPGEFERLLHKAGLSSDDLDWFVPHSANLRMIESICEKTPF-PIEKTLTSVEHYGNTSSVSIVLALDLAVKAGKLKKDQIVLLFGFGGGLTYTGLLIKWGM
2QNZ Chain:B ((17-331))-------SVGAYRPERVVTNDEIC-----SDEWIYTRTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVV---GETPFQGIGPTVAGSDGEQAD-----AIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVR---


General information:
TITO was launched using:
RESULT:

Template: 2QNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1920 -218630 -113.87 -723.94
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -113.87
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_2QNZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QNZ-query.scw
PDB file : Tito_Scwrl_2QNZ.pdb: