Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKFEGKIALVTGGTSGIGLATAQKFVNEGAYVYITGRRQNELDKAVNQIGKNVTGVQGDISKLEDLDKLYDIIKQEKGKLDILFANAGIGNFLPLGEITEEQVDRTFDINVKGTIFTVQKALSLFPDKVGSIIVTGSTAGSIGNPAFSVYGASKAALRALVRNWILDLKGTEIRVNVVSPGGILTPAYDELFGDALEEVLENSRNTVPAGKVGTPEEVANAVSFLASDESSYLTGVELFVDGGLAQV
4I5D Chain:B ((20-262))------KTAVITGGNSGIGLATAKRFVAEGAYVFIVGRRRKELEQAAAEIGRNVTAVKADVTKLEDLDRLYAIVREQRGSIDVLFANSGAIEQKTLEEITPEHYDRTFDVNVRGLIFTVQKALPLLRDG-GSVILTSSVAGVLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVNAVSPGAIDTP--------------AKFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGIELFVDGGLTQV


General information:
TITO was launched using:
RESULT:

Template: 4I5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1271 -124282 -97.78 -547.50
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.86

3D Compatibility (PKB) : -97.78
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_4I5D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4I5D-query.scw
PDB file : Tito_Scwrl_4I5D.pdb: