Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDPLDILTNIDDVLPYYQAIFSAEEQKVVGYEVLGRILAD-SEIQSLGPFFLDAGIPEEYKLEVDNRIIRQALDRFL-E---ADSDLLIFMNQDANLLMLDHGESFLELLKEYEA-KGIELHRFVLEITEHNFEGDIEQLYHMLAYYRTYGIKIAVDNIGKESSNLDRIALLSPDLLKIDLQALKVSQPSPSYEHVLYSISLLARKIGAALLYEDIEANFQLQYAWRNGGRYFQGYYLVSPSETFLERDVLKQRLKTEFHQFITHEKKKLETVYEHSEQFYKRVHQAVTSLRKNNLSSDDDFIKKLAEELTDCSFRIYMCDEEGDQLTGNVFKQDGEWIYQPEYAEKNWSWRPYFLENIMRMRNLRKGFFSDLYSDLETGEMIRTFSYPMDDQMYLFIDLPYSYLYEQDGLI
4Y9M Chain:A ((8-249))-SSELRRALEANEFIPYYQPLSPGQGGRWIGVEVLMRWRHPREGLIRPDLFIPFAE-RSGLIVPMTRALMRQVAEDLGGHAGKLEPGFHIGFNISATHCHE---LALVDDCRELLAAFPPGHITLVLELTERELIESSEVTDRLFDELHALGVKIAIDDFGTGHSSLAYLRKFQVDCLKIDQSFVARIGIDTLSGHILDSIVELSAKLDLDIVAEGVETPEQRDYLAARGVDYLQGYLIGRPMPLES----------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Y9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1130 -166515 -147.36 -705.57
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -147.36
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_4Y9M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Y9M-query.scw
PDB file : Tito_Scwrl_4Y9M.pdb: