Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMALVRPFPIVQVVGFQNSGKTTFIERILEKASEQGVHLGCLKHHGHGGEPQTLTEGKDTDRYKAAGADVTAVEGAGVLQLTARRNWDLARLIELYQFLETDCLLIEGFKKAPYPKVVILSEKEDLEALQAVNIIAIIYRKKEHMTEHQGLPVFHA-DDPVAVDFVLSQLKGESA
4NKR Chain:A ((1-163))------FPIVQVVGFQNSGKTTFIERILEKASEQGLNLGCLKHH---------------DRYQAAGADVTAVEGAGVLQLTARRLWDLTRLIELYQFLETDCLLIEGFKKAPYPKVVILSEKEDLEALKTVNTIAIIYRKKEHMTEHQGLPIFHADDPVAV-DLVLSQLK----


General information:
TITO was launched using:
RESULT:

Template: 4NKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 595 -114432 -192.32 -778.45
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.91

3D Compatibility (PKB) : -192.32
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.692

(partial model without unconserved sides chains):
PDB file : Tito_4NKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NKR-query.scw
PDB file : Tito_Scwrl_4NKR.pdb: