Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADSLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQQ
4IHF Chain:L ((6-77))---IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYING--


General information:
TITO was launched using:
RESULT:

Template: 4IHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 237 -44576 -188.08 -619.11
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain L : 0.87

3D Compatibility (PKB) : -188.08
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.785

(partial model without unconserved sides chains):
PDB file : Tito_4IHF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IHF-query.scw
PDB file : Tito_Scwrl_4IHF.pdb: