Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSTLRKDLIELFSQAGNEFISGQKISDALGCSRTAVWKHIEELRKEGYEVEAVRRKGYRLIKKPGKLSESEIRFGLKTEVMGQHLIYHDVLSSTQKTAHELANNNAPEGTLVVADKQTAGRGRMSRVWHSQEGNGVWMSLILRPDIPLQKTPQLTLLAAVAVVQGIEEAAGIQTDIKWPNDILINGKKTVGILTEMQAEEDRVRSVIIGIGINVNQQ-PNDFPDELKDIATSLSQAAGEKIDRAGVIQHILLCFEKRYRDYMTHGFTPIKLLWESYALGIGTNMRARTL-NGTFYGKALGIDDEGVLLLETNEG-IKKIYSADIELG
2ZGW Chain:B ((2-232))--------------------------------------------------------------------------LGLKTSIIGRRVIYFQEITSTNEFAK---TSYLEEGTVIVADKQTMGHGALN-KWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFS-IDGRIKWPNDVLVNYKAIAGVLVEGKGDK-----IVLGIGLNVNNKVPNG--------ATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGV----RVKILGDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSL-


General information:
TITO was launched using:
RESULT:

Template: 2ZGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1230 -105900 -86.10 -466.52
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -86.10
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_2ZGW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZGW-query.scw
PDB file : Tito_Scwrl_2ZGW.pdb: