Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLEEKTIAKEQIFSGKV-IDLYVEDVELPNGKAS---KREIVKHPGAVAVLAVTD--EGKIIMVKQFRKPLERT-----IVEIPAGKLEKGEEPEYTALRELEEETGYTAKKLTKITAFYTSPGFADEIVHVFLAE-ELSVLEEKREL-DEDEFVEVMEVTLEDALKLVESREVYDAKTAYAIQYLQLKEALQAQK
1GA7 Chain:B ((19-201))--------IARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFER-GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHH------


General information:
TITO was launched using:
RESULT:

Template: 1GA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 712 43303 60.82 254.72
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : 60.82
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_1GA7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GA7-query.scw
PDB file : Tito_Scwrl_1GA7.pdb: