Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDILQFKFPK---NQSYKIFGNIPYNISTDIIRKIVFDSI-ADEIYLIVEYGFAKRLLN--T---KRSLALFLMAEVDISILSMVPREYFHPKPKVNSSLIRLNRKKS-RISHKDKQKYNYFVMKWVNKE-------YKKIFTKNQFNNSLKHAGI---DDLNNISFEQFLSLFNSYKLFNK
3TQS Chain:A ((12-258))---------QHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKY-NQQKNITIYQNDALQFDFSSVKTDKPLRVVGNLPYNISTPLLFHLFSQIHCIEDMHFMLQKEVVRRITAEVGSHDYGRLSVMAQYFCDNTYLFTVSPQAFTPPPRVESAIIRLIPRHNFTPVAKNLDQLSHVVKEAFSYRRKTVGNALKKLINPSQWP----LLEINPQLRPQELTVEDFVKISNILN----


General information:
TITO was launched using:
RESULT:

Template: 3TQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1034 -21745 -21.03 -96.22
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -21.03
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.570

(partial model without unconserved sides chains):
PDB file : Tito_3TQS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TQS-query.scw
PDB file : Tito_Scwrl_3TQS.pdb: