Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLYES
3MLB Chain:B ((3-191))MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPH----NITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES


General information:
TITO was launched using:
RESULT:

Template: 3MLB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 891 -142136 -159.52 -768.30
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.90

3D Compatibility (PKB) : -159.52
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.637

(partial model without unconserved sides chains):
PDB file : Tito_3MLB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MLB-query.scw
PDB file : Tito_Scwrl_3MLB.pdb: