Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRFSLIMMTGLLFGLTSPAFAAEKTETEAKAPANVAVLLDASGSMAKRIDGVSKFNSAKKEISKFASSLP-EGTQVKMSVFGSEGNNKNSGKVQSCEAIRNVYGFQSF-NEQSFLNSLNTIG-PTGWTPIAKALNEAKSSFDQL----DAKGEKVVYLLTDGEETCGG-NPIKTAKELQKDNITVNVIGFDYKEG---YKGQLNAIAKVGGGE-YFPAYTQKDVEKIFTQQSLMLSK
1MF7 Chain:A ((129-316))------------------------------PQEDSDIAFLIDGSGSIIP-----HDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEEF--------------RIHFTFKEFQNNPNPRSLVKPITQLLGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEALKTIQNQLREKI--


General information:
TITO was launched using:
RESULT:

Template: 1MF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 920 46988 51.07 266.97
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 51.07
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_1MF7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MF7-query.scw
PDB file : Tito_Scwrl_1MF7.pdb: