Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAHDQELRRRAYEEVEKKEPIANSDPHRQHFHIMPPVGLLNDPNGVIYWKGSYHVFFQWQPFQTGHGAKFWGHYTTQDVVNWKREEIALAPSDWFDKNGCYSGSAVTK-D-------DRLYLFYTGNVRDQDGNRETYQCLAVSDD-GLSFEKKG-VVARLPE----------GYTAHFRDPKVWEH--EGTWYMVIGAQTENLKGQAVLFASDNLTEWRFLGPITGAGFNGLDDFGYMWECPDLFSLQ-----GSDVLIVSPQGLEADGFRYQNVYQSGYFVGRLDYNKPELKHG--EFTELDQGFDFYAPQTLED---DQGRRILFAWMAVPDQDEGSHPT-IDCHWIHCMTLPRQLTLS---GQ--KLIQQPLPELKAMRRNEKKIH-INMHGSSGALPVEKPERTEILLE-DIHTESGFSISIRGT------ATFSFHKDEGIVTLERKSFDG-KRT-----E-ARHCRI-KDLHTVHMFLDASSVEIFINNGEEVLSARYFPFPGNHEVTASATGK--SEMNVGIWTLM
4FFH Chain:A ((2-479))-----------------------------AVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNN-GPG-GWDHASTTDGVAFTHHGTVMPLRP---DFPVWSGSAVVDTANTAGFGAGAVVALATQPTDG--VRKYQEQYLYWSTDGGFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRL-----RYAAFYTSPNLRDWTLRRNFDYP-----NHALGGIECPDLFEITADDGTRHWVLAASMDAYGI-----GLPMTYAYWTGTWDGE--QFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVD--GSAVLPWNGRAYEIELDIAWDTATNVGISVGRSPDGTRHTNIGKY--GADLYVDRGPSDLAGYSLAPYSRAAAPIDPGARSVHLRILVDTQSVEVFVNAGHTVLSQQVHFAEGDTGISLYTDGGPAHFTGIVVREIG


General information:
TITO was launched using:
RESULT:

Template: 4FFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2250 -8935 -3.97 -21.17
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -3.97
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_4FFH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FFH-query.scw
PDB file : Tito_Scwrl_4FFH.pdb: