Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIMKMTHLNMKDFNKPNEPFVVFGRMIPAFENGVWTYTEERFSKPYFKQYEDDDMDVSYVEEEGKAAFLYYLENNCIGRIKIRSNWNGYALIEDIAVAKDYRKKGVGTALLHKAIEWAKENHFCGLMLETQDINISACHFYAKHHFIIGAVDTMLYSNFPTANEIAIFWYYKF
2CNT Chain:A ((41-140))-----------------------------------------------------------------LNLKLTADDRMAAFAITQVVL-DEATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPTAQGHEDAI-------


General information:
TITO was launched using:
RESULT:

Template: 2CNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 365 -65170 -178.55 -651.70
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -178.55
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.314

(partial model without unconserved sides chains):
PDB file : Tito_2CNT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CNT-query.scw
PDB file : Tito_Scwrl_2CNT.pdb: