Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN |
| 1W4S Chain:A ((26-171)) | --MYHVGDYVYVEPAEANLQPHIVCIERLWEDSA------------GEKWLYGCWFYRPNETF------------HLATRKFLEK----------EVFKSDYYNKVP--VSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYS--AKTKSFKK---IKLWTMPVSSV--------RFVPRDVPLPVVRVASVFA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27419 for 986 contacts (-27.8/contact) +
2D Compatibility (PS) -14472 + (NN) 1422 + (LL) 4056
1D Compatibility (HY) -8800 + (ID) 1200
Total energy: -46413.0 ( -47.07 by residue)
QMean score : 0.241
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