Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKKYGVKEKDQVVAHILNLLLTGKLRSGDRVDR-NEIAHGLGVSRVPIQEALVQLEHDGIVSTRYHRGAFIERFDV--ATILEHHELDGLLNGIASARAAANPTPRILGQLDAVMRSLRNSKESRAFAECVWEYRRTVNDEYAGPRLHATIRASQNLIPRVFWMTYQNSRDDVLPFYEEENAAIHRREPEAARAACIGRSELMAQTMLAELFRRRVLVPPEGACPGPFGAPIPGFARSYQPSSPVP |
| 4HAM Chain:A ((10-127)) | ---KSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGTFIANQTDKLSSPKKLAETRTKLKETILDLVYLGVNIEEIHKLADEYSQDII------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31124 for 664 contacts (-46.9/contact) +
2D Compatibility (PS) -12443 + (NN) -6184 + (LL) 8352
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -44849.0 ( -67.54 by residue)
QMean score : 0.401
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