Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKACVVKELSGPSGMVYT-DIDEVSGDGGKVVIDVRAAGVCFPDLLLTKGEYQLKLTPPFVPGMETAGVVRSAPSD-AGFHVGERVSAFG-VLGGYAEQIAVPVANVVRSPVELDDAGAVSLLVNYNTMYFALARRAALRPGDTVLVLGAAGGVGTAAVQIAKAMQAGKVIAMVHREGAIDYVASLGADVVLPLTE-GWAQQVRDHTYGQGVDIVVDPIGGPTFDDALGVLAIDGKLLLIGFAAGAVPTLKVNRLLVRNISVVGVGWGEYLNAVPGSAALFAWGLNQLVFLG-LRPPPPQRYPLSEAQAALQSLDDGG-VLGKVVLEP |
| 1YB5 Chain:A ((30-350)) | MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK-ILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT--IEINPRDTMAKESSIIGVTLFSSTKEEFQQ---YAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259212 for 2814 contacts (-92.1/contact) +
2D Compatibility (PS) -33755 + (NN) -7906 + (LL) 724
1D Compatibility (HY) -12800 + (ID) 4350
Total energy: -317299.0 ( -112.76 by residue)
QMean score : 0.494
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