Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MTLAIPSGIDL-SHIDADARPQDDLFGHVNGRWLAEHEIPADRATDGAFRSLFDRAETQVRDLIIQASQAGAAVGTDAQRIGDLYASFLDEEAVERAGVQPLHDELATIDSAADATELAAALGTLQRAGVGGGIGVYVDTDSKDSTRYLVHFTQSGIGLPDESYYRDEQHAAVLAAYPGHIARMFGLVYGGESRDHAKTADRIVALETKLADAHWDVVKRRDADLGY-----NLRTFAQLQTEGAGFDWVSWVTALGSAPDAMTELVVRQPDYLVTF----------ASLWASVNVEDWKCWARWRLIRARAPWLTRALVAEDFEFYGRTLTGA--QQLRDRWKRGVSLVENL---MGDAVGKLYVQRHFPPDAKSRIDTLVDNL---QEAYRISISELDWMTPQTRQRALAKLNKFTAKVGYPIKWRDYSKLAIDRDDLYGNVQRGYAVNHDRELAKL-FGPVDRDEWFMTPQTVNAYYNPG--MNEIVFPAAILQPPFFDPQADEAANYGGIGAVIGHEIGHGFDDQGAKYDGDGNLVDWWTDDDRTEFAARTKALIEQYHAYTPRDLVDHPGPPHVQGAFTIGENIGDLGGLSIALLAYQLSLNGNPAPVID----GL------TGMQRVFFGWAQIWRTK---SRAAEAIRRLAVDPHSPPEFRCNGVVRNVDAFYQ---------AFDVTEDDALFLDPQRRVRIWN |
| 5EY9 Chain:A ((3-626)) | YHNPFIVNGKIRFPENTNLVRHVEKWARVRGDK--------LAYRFLDFSTERDG----------VERDILWSEFSARNRAVGARLQQV-----------------TQP-GDRIAILCPQ-NLDYLISFFGALYS----GRIAVP---------------------LFDPAEHVGRLHAVLDDCTPSTILT---------TTDSAEGVRKFIRSRSAKERPRVIAVDAVPTEVASTWQQPNELTTAYLQYTVPSGVQITHLNLPTNVLQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTFMTPAAFVRRPGRWI-RELARKPGETGG-TFSAAPNFAFEHAAMRGVPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFKAFEPYGLRETAVKPSYG-------------LAEATLFVSTTPMD---EVPTVIHVDRDELNKQRFVEVAADAPNAVAQVSAGKVGVDEWAVIVDTETASELPDGQIGEIWLHGNNLGIGYWGKEEESAQTFRNILKSRVPE-SHA---EGAPDDG-----LWVRTGDYGTYFKG-----HLYIAGRIKDLVIIDGRNHYPQDLEYTAQESTKALRVGYVAAFSVPANQLPQKVFDDPHAGLSFDPEDTSEQLVIVGERAAGTHKLEYQPIADDIRAAIAVGHGVT-------VRDVLLVSAGTIPRTSSGKIGRRACRTAYIDGSLRSTVFA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5EY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -88050 for 4645 contacts (-19.0/contact) +
2D Compatibility (PS) -58505 + (NN) -12888 + (LL) 6620
1D Compatibility (HY) -12000 + (ID) 6050
Total energy: -170873.0 ( -36.79 by residue)
QMean score : 0.198
|
|
|