Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDQRWLIDKSALVRL---TDSPDMEIWSNRIERGLVHITGVTRLEVGFSAE-CGEIARREFREPPLSAMPVEYLTPRI---EDRALEVQTLLADRGHHRGPSI--PDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHRPPSA
2BSQ Chain:A ((1-143))
----MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAEMRLGVALLLNGKKKNVLHERMEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSMTVA--TRDTGSFFAADVAVFNPWHLEHHH-
General information:
TITO was launched using:
RESULT:
Template:
2BSQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30247 for 936 contacts (-32.3/contact) +
2D Compatibility (PS) -14042 + (NN) -3512 + (LL) 684
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -53717.0 ( -57.39 by residue)
QMean score : 0.331
(partial model without unconserved sides chains):
PDB file :
Tito_2BSQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BSQ-query.scw
PDB file :
Tito_Scwrl_2BSQ.pdb
: