Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEHTDFELLELATPYALNAVSDDERADIDRRVAAA-----PSPVAAAFNDEVRAVRETMAVVSAATTAEPPAHLRTAILDATKPEVRRQSRWRTAAFASAAAIAVGLGAFGLGVLTRPSPPPTVAEQVLTAPDVRTVSRPLGAGTATVVFSRDRNTGLLVMNNVAPPSRGTVYQMWLLGGAKGPRSAGTMGTAAVTPSTTATLTDLGASTALAFTVEPGTGSPQPTGTILAELPLG |
4NQW Chain:B ((7-79)) | ------FELLELATPYALNAVSDDERADIDRRVAAAPSPVAA-----AFNDEVRAVRETMAVVSAATTAEPPAHLRTAILDATK--------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14363 for 331 contacts (-43.4/contact) +
2D Compatibility (PS) -7035 + (NN) 1119 + (LL) 8364
1D Compatibility (HY) -7200 + (ID) 3350
Total energy: -22465.0 ( -67.87 by residue)
QMean score : 0.637
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