Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRFLTSIVAWLRAGYPEGIPPTDSFAVLALLC-RRLSHDEVKAVANELMRLGD-F-DQIDIGVVITHFTDELPSPEDV-ERVRARLAAQGWPLDDVRDREEHA
3MIX Chain:A ((490-571))
----TKQLIDHLKESYPV---------LVEEVTPNPLSVGDIQKVLAKLLKEKVSIRNLVTIFETLADYGKLTTDSDLLTEYTRQALAK---------------
General information:
TITO was launched using:
RESULT:
Template:
3MIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51316 for 490 contacts (-104.7/contact) +
2D Compatibility (PS) -7757 + (NN) -4134 + (LL) 1036
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -66771.0 ( -136.27 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_3MIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MIX-query.scw
PDB file :
Tito_Scwrl_3MIX.pdb
: