Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALDWRSALTA---DEQRSVRALVTATTAVDGVA----PVGEQVLRELGQQR----TEHLLVAGSRPGGPIIGYLNLSPP-------RGAGGAMAELVVHPQSRRRGIGTAMARAALAKTA-GRN---QFW---AHGTLDPARATASA---------LGLVGVRELIQMRRPLRDIPEPTIPDGVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWF------DPDGLILAFGDSPRERPGRLLGFHWTK-VHPD--------HPGLGEVYVLGVDPAAQR-------------RGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVDTAYALAGTDN |
| 1IIC Chain:A ((44-388)) | -SSFEWCS-IDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVK-ETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKE-DIDQVFELFKRYQSRFELIQIFTKEEFEHNFIG-EESLPLDKQVIFSYVVEQP-----DGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRL-CELIYDACILAK-NAN---------MDVFNALTSQDNT---LFLDDLKFGPGDGFLN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69771 for 1989 contacts (-35.1/contact) +
2D Compatibility (PS) -30372 + (NN) -9666 + (LL) 1732
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -116477.0 ( -58.56 by residue)
QMean score : 0.327
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