Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MDAAQVIEPAHAGQDVDEAAVAARELSGAERAL--------VGDLVRQA-----RAEGVALT-GPDGLLKALTKTVLEAALQEEMTEHLGYDRHAAAGRGSGNSRNGSRNKKVITDACGQVEIAVPRDRNGTFEPVIVGKRKRRVTD-VDRVVLSLYAKGLTTGEIAAHFADVYGVSVSKDTISRITDRVIEEMQAWWSRPLEKVYAAVFIDAIMVKIRDGQVRNRPVYAAIGVDLDGHKDILGMWAGEGDGESAKFWLAVLTDLRNRGVKDIFFLVCDGLKGLPD--SVSAAFPLATVQTCIIHLIRNTFRYASRKYWDKIS-VDLKPIYTAASAAEARLRYEE---FAEKWG-KPYPAITRLWDSAWEEFIPFLDYDVEIRRVPCSTNAIESLNARYRRAVRARGHFPNEQSALKTLYLVTRSLDPKGTGQTKWAVRWKPALNALAITFADRMPAAEER-- |
| 5A07 Chain:A ((40-434)) | DHDAEVLDSIMDRLHEPLYEKDTFDPNEVLAENKQLYEEFLLQEISEPKVDNLVRSGDPLAGKAKGTILSLVRNSDLEDIISSIQQ--LEEEYNKNFGYPYTFLN------------DEEFTDEFKDGIKSILPKDRVVEFGTI--GPDNWNMPDSIDRERYDQEMDKMSKENI--QYAEV---------------ESYHNMCRFYSKE---FYHHPLLSKYKYVWR--LEPNVNFYCKINYD------VFQFMNK--NDKIYGFVLNLYDS--PQTIETLWTSTMDFVEEHPNYLNVNGAFAWLKDNSQNPKNYDYTQGYSTCHFWTNFEIVDLDFLRSEPYEKYMQYLEEKGGFYYERWGDAPVRSLALALFADKSSIHWFRD--IGYHHTPYTNCPTCPADSDRCNGNCVPGKF------------------------TPWSDLDNQ--NCQATWIRHSMSEEELEMY |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96223 for 2885 contacts (-33.4/contact) +
2D Compatibility (PS) -37709 + (NN) -5849 + (LL) 2708
1D Compatibility (HY) -16000 + (ID) 3400
Total energy: -156473.0 ( -54.24 by residue)
QMean score : 0.231
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