Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTVTGAAGIGLATLAADGSVLDTWFPAPELTESGTSATSRLAVSDVPVELAALIGRDDDRRTETIAVRTVIGSLDDVAADPYDAYLRLHLLSHRLVAPHGLNAGGLFGVLTNVVWTNHGPCAIDGFEAVRARLRRRGPVTVYGVDKFPRMVDYVVPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGLGISLGDDCVVEAGLYVTAGTRVTMPDSNSVKARELSGSSNLLFRRNSVSGAVEVLARDGQGIALNEDLHAN |
| 5E3Q Chain:A ((1-286)) | ----TTASATGIATLTSTGDVLDVWYPEIGSTDQSA--------------LTPLEGVDEDRNVTRKIVTT-TIDIDAAPTDTYDAWLRLHLLSHRVFRPHTINLDGIFGLLNNVVWTNFGPCAVDGFALTRARLSRRGQVTVYSVDKFPRMVDYVVPSGVRIGDADRVRLGAYLADGTTVMHEGFVNFNAGTLGASMVEGRISAGVTVDDGTDVGGGASIMG--------VISLGKRCLLGANSGCGIPLGDDCIIEAGLYITAGTKVLFD-GSLHKASTLAGSNGLIFRRDSVSGQVVAVPNTK-V---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5E3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196725 for 2329 contacts (-84.5/contact) +
2D Compatibility (PS) -30848 + (NN) -18679 + (LL) 2192
1D Compatibility (HY) -29200 + (ID) 9050
Total energy: -282310.0 ( -121.22 by residue)
QMean score : 0.524
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