Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSATVEKRLDFGLLGPLQMTI-------DGTPVPSGTPKQRAVLAMLVINRNRPVGVDALITALWEEWPPSGARASIHSYVSNLRKLLGGAGIDPRVVLAAAPPGYRLSIPDNTCDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERILRQQPLDAKKSAKTTAAGTVTVLDQRTMASGQQAVAYLHDIASGRGYPLQAAATRIGRLHDNDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRSAVTLNDGDHIRICDHEFTFQISAGTHGGT |
4NHJ Chain:A ((17-114)) | ------------TISFGSLTIDPVNRQVMLGGENVAL-STADFDMLWELATHAGQIMDRDALLKNLRGVTY-DGMDRSVDVAISRLRKKLLDNATEPYRIKTVRNKGYLFAP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64019 for 605 contacts (-105.8/contact) +
2D Compatibility (PS) -9777 + (NN) -3874 + (LL) 19952
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: -59918.0 ( -99.04 by residue)
QMean score : 0.603
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