Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPRHLLTAADLSRDDATAILDDADRFAQALVGRDIKKLPTLRGRTVVTMFYENSTRTRVSFEVAGKWMSADVINVS-AAGSSVGKGESLRDTALTLRAAGADALIIRHPASGAAHLLAQWTGAHNDGPAVINAGDGTHEHPTQALLDALTIRQRLGGIEGRRIVIVGDILHSRVARSNVMLLDTL-GAEVVLVAPPTL-LPVG-VTGWPATVSHDFDAE-----LPAADAVLMLRVQAERMNGGFFPSVREYSVRYGLTERRQAMLPGHA-VVLHPGPMVRGMEITSSVADSSQSAVLQQVSNGVQVRMAVLFHVLVGAQDAGKEGAA |
| 2RGW Chain:F ((2-296)) | ---KHLISMKDIGKEEILEILDEARKMEELLNTK--RPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVI-SGYADIIVLRHPSEGAARLASEYSQV-----PIINAG----QHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKER-----FPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVD--EIDYDVDDLPQAKYFKQSFYGIPVRMAIL---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2RGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -158865 for 2214 contacts (-71.8/contact) +
2D Compatibility (PS) -30465 + (NN) -12295 + (LL) 732
1D Compatibility (HY) -21200 + (ID) 5250
Total energy: -227343.0 ( -102.68 by residue)
QMean score : 0.521
|
|
|