Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGATLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLGFTSGGV----------RLTRTKTRPYLGDL-GAAVAPRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG |
1HG0 Chain:C ((83-315)) | ----------------------------------------------------------------------------------RDDVDGVVITHGTDTVEESAYFLHLTVKSDKPVVFVAAMRPATAISADGPMNLLEAVRVAGDKQSRGRGVMVVINDRIGSARYITKTNASTLDTFRANEEGYL--GVIIGNRIYYQNRIDKLHTTRSVFDVRGLTSLPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMGAGSVSVRGIAGMRKALEKG---VVVMRST-----RTGNGIVPPDE--ELPGLVSDSLNPAHARILLMLALTRTS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138018 for 1771 contacts (-77.9/contact) +
2D Compatibility (PS) -25264 + (NN) -20711 + (LL) 5536
1D Compatibility (HY) -16000 + (ID) 4200
Total energy: -198657.0 ( -112.17 by residue)
QMean score : 0.494
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